Department of Translational and Applied Genomics (TAG)

Our Publications


Underutilization of Lynch Syndrome screening in a multisite study of colorectal cancer patients. 

Cross D, Rahm AK, Kauffman T, Webster J, Le A, Fiegelson HS, Alexander G, Meier P, Onitilo A, Pawloski P, Williams A, Honda S, Daida Y, McCarty C, Goddard K.
Genet Med 2013 Dec;15(12):933-40. PMCID: PMC3855589 

Incidence and clinical characteristics of herpes zoster among children in the varicella vaccine era, 2005-2009. 

Weinmann S, Chun C, Schmid DS, Roberts M, Vandermeer M, Riedlinger K, Bialek SR, Marin M.
J Infect Dis 2013 Dec 1;208(11):1859-68. [Epub 2013 Aug 6] 

Oncologists’ attitudes towards KRAS testing: a multi-site study.

Harris JN, Liljestrand P, Alexander GL, Goddard KA, Kauffman T, Koleveska T, McCarty C, O'Neill S, Pawloski P, Rahm A, Williams A, Somkin CP.
Cancer Med 2013 Dec;2(6):881-8. PMCID: PMC3892392

Risk Assessment, Genetic Counseling, and Genetic Testing for BRCA-Related Cancer: Systematic Review to Update the U.S. Preventive Services Task Force Recommendation [Internet].

Nelson HD, Fu R, Goddard K, Mitchell JP, Okinaka-Hu L, Pappas M, Zakher B.
Rockville (MD): Agency for Healthcare Research and Quality (US); 2013 Dec. Report No.: 12-05164-EF-1

Family Investigation of Nephropathy and Diabetes Research Group. A Genome-Wide Search for Linkage of Estimated Glomerular Filtration Rate (eGFR) in the Family Investigation of Nephropathy and Diabetes (FIND).

Thameem F, Igo RP Jr, Freedman BI, Langefeld C, Hanson RL, Schelling JR, Elston RC, Duggirala R, Nicholas SB, Goddard KA, Divers J, Guo X, Ipp E, Kimmel PL, Meoni LA, Shah VO, Smith MW, Winkler CA, Zager PG, Knowler WC, Nelson RG, Pahl MV, Parekh RS, Kao WH, Rasooly RS, Adler SG, Abboud HE, Iyengar SK, Sedor JR.
PLoS One 2013 Dec 17;8(12):e81888.
PMCID: PMC3866106

Effects of transitioning from conventional methods to liquid-based methods on unsatisfactory Papanicolaou tests: Results from a multicenter US study. 

Owens CL, Peterson D, Kamineni A, Buist DS, Weinmann S, Ross TR, Williams AE, Stark A, Adams KF, Field TS.
Cancer Cytopathol 2013 Oct;121(10):568-75.
PMCID: PMC3800270 [Epub 2013 May 8]

Immunohistochemical expression of ERG in the molecular epidemiology of fatal prostate cancer study.

Weinmann S, Van Den Eeden S, Haque R, Richert-Boe K, Chen C, Gao L, Berry DL, Kallakury BV, Alumkal JJ.
Prostate 2013 Sep;73(13):1371-7.
PMCID: PMC3745520 [Epub 2013 May 9]

Efficacy of screening in preventing cervical cancer among older women. 

Kamineni A, Weinmann S, Shy KK, Glass AG, Weis NS.
Cancer Causes Control 2013 Sep;24(9):1653-60. [Epub 2013 Jun 7] 

Description and pilot results from a novel method for evaluating return of incidental findings from next-generation sequencing technologies.

Goddard KAB, Whitlock EP, Berg JS, Williams MS, Webber EM, Webster JA, Lin JS, Schrader KA, Campos-Outcalt D, Offit K, Feigelson HS, Hollombe C.
Genet Med 2013 Sep;15(9):721-8. PMCID: PMC3927794

The association of low socioeconomic status and the risk of having a child with Down syndrome: a report from the National Down Syndrome Project. 

Hunter JE, Allen EG, Shin M, Bean LJ, Correa A, Druschel C, Hobbs CA, O'Leary LA, Romitti PA, Royle MH, Torfs CP, Freeman SB, Sherman SL.
Genet Med 2013 Sep;15(9):698-705. 
Epub 2013 Apr 4. PMCID: PMC4122862. 

Screening colonoscopy and risk for incident late-stage colorectal cancer diagnosis in average-risk adults: A nested case-control study. 

Doubeni CA, Weinmann S, Adams K, Kamineni A, Buist DS, Ash AS, Rutter CM, Doria-Rose VP, Corley DA, Greenlee RT, Chubak J, Williams A, Kroll-Desrosiers AR, Johnson E, Webster J, Richert-Boe K, Levin TR, Fletcher RH, Weiss NS.
Ann Intern Med 2013 Mar 5;158(5 Pt 1):312-20. PMCID: PMC3752391 

The use of computed tomography in pediatrics and the associated radiation exposure and estimated cancer risk.

Miglioretti DL, Johnson E, Williams A, Greenlee RT, Weinmann S, Solberg LI, Feigelson HS, Roblin D, Flynn MJ, Vanneman N, Smith-Bindman R.
JAMA Pediatr 2013 Aug 1;167(8):700-7. PMCID: PMC3936795

Comparative Effectiveness Research in Cancer Genomics and Precision Medicine: Current Landscape and Future Prospects.

Simonds NI, Khoury MJ, Schully SD, Armstrong K, Cohn W, Fenstermacher D, Ginsburg GS, Goddard KAB, Knaus W, Lyman GH, Ramsey SD, Xu J, Freedman AN.
J Natl Cancer Inst 2013 Jul 3;105(13):929-936. PMCID: PMC3699435

Cervical intraepithelial neoplasia grade 3 and adenocarcinoma in situ: comparison of ICD-9 codes and pathology results--Kaiser Permanente, United States, 2000-2005. 

Surie D, Dunne EF, Naleway AL, Weinmann S, Klein NP, Baxter R, Hutchins K, Gee J, Markowitz L.
Cancer Epidemiol Biomarkers Prev 2013 Jun;22(6):1129-32. [Epub 2013 Apr 5] 

Transforming epidemiology for 21st century medicine and public health.

Khoury MJ, Lam TK, Ioannidis JPA, Hartge P, Spitz MR, Buring JE,  Chanock SJ,  Croyle RT, Goddard KA, Ginsburg GS, Herceg Z, Hiatt RA, Hoover RN,  Hunter DJ, Kramer BS, Lauer MS, Meyerhardt  JA,  Olopade OI,  Palmer JR, Sellers TA,  Seminara D,  Ransohoff DF, Rebbeck TR, Tourassi G, Winn DM, Zauber A, Schully SD.
Cancer Epidemiol Biomarkers Prev 2013 Apr;22(4):508-16.
PMCID: PMC3625652

Prevalence of HPV types in cervical specimens from an integrated health care delivery system: Baseline assessment to measure HPV vaccine impact. 

Dunne EF, Baxter R, Naleway A, Klein NP, Weinmann S, Riedlinger K, Fetterman B, Chao C, Steinau M, Zamarron M, Gee J, Markowitz LE, Unger ER.
Cancer Causes Control 2013 Feb;24(2):403-7. [Epub 2013 Jan 5] 

KRAS Testing and Epidermal Growth Factor Receptor Inhibitor Treatment for Colorectal Cancer in Community Practice Settings. 

Webster J, Kauffman T, Feigelson HS, Pawloski P, Onitilo AA, Potosky AL, Cross D, Meier P,  Mirabedi AS, Delate T, Daida Y, Williams A, Alexander GL, McCarty CA, Honda S, Kushi L, Goddard KAB; on behalf of the CERGEN study team.
Cancer Epidemiology, Biomarkers & Prevention 2013 Jan;22(1):91-101. PMCID: PMC3567775 

Identification of evidence-based biospecimen quality-control tools: a report of the International Society for Biological and Environmental Repositories (ISBER) Biospecimen Science Working Group.

Betsou F, Gunter E, Clements J, DeSouza Y, Goddard KAB, Guadagni F, Yan W, Skubitz A, Somiari S, Yeadon T, Chuaqui R.
J Mol Diagn 2013 Jan;15(1):3-16. PMCID: PMC5707193

Reversible folding of human peripheral myelin protein 22, a tetraspan membrane protein. 

Schlebach JP, Peng D, Kroncke BM, Mittendorf KF, Narayan M, Carter BD, Sanders CR.
Biochemistry 2013. 52, 3229-3241. 

Publications by year


Kaiser Permanente Research